tgvaughan/PEA
PEA Extends Ape - a few function definitions to make it easier to work with time trees in APE
Developer Profile
tgvaughan
Discovered public repositories for tgvaughan in the GitHub catalog.
tgvaughan/EpiInf
BEAST 2 package for performing inference on epidemiological parameters using the exact likelihood.
tgvaughan/bacter
Bacterial phylogenetics in BEAST 2.
tgvaughan/icytree
Browser-based utility for phylogenetic tree visualisation.
tgvaughan/jPhyloPaint
Java implementation of my non-interactive phylogenetic tree painter.
tgvaughan/PhyloTools
Tree/network-wrangling scripts
tgvaughan/ModelSelection
BEAST 2 code for simple model selection.
tgvaughan/JTrace
A clumsy attempt at ray tracing.
tgvaughan/taskmuxer
Allocates tasks to you which are randomly chosen from a to-do list.
tgvaughan/MultiTypeTree
BEAST 2 package which provides support for multi-type trees: phylogenetic trees on structured populations.
tgvaughan/ViralEvolutionSims
Within-host viral evolution simulation codes. (Single lumped sequence space dimension only.)
tgvaughan/MASTER
A versatile simulation engine for stochastic population dynamics models.
tgvaughan/h5shell
Command shell interface for HDF5 scientific data files.
tgvaughan/StochasticVirusSim
Stochastic within-host viral infection simulators (no mutation)
tgvaughan/PirateScope
wxPython oscilloscope client for dangerousprototypes.com's Bus Pirate.