stuarteberg/gala
Automatic segmentation of electron microscopy volumes
Discovered public repositories for stuarteberg in the GitHub catalog.
Automatic segmentation of electron microscopy volumes
Simple python client for retrieving volume data from a DVID server, and a mock server for convenient testing.
Benchmarking potential dvid messaging schemes.
Simple serialization benchmarks for image data and thrift
Simple serialization benchmarks for image data and protobuf
read/write to a blocked, in-memory compressed array
Public repository.
A Vagrantfile for creating and running gui-based tests for ilastik.
FlyEM-tuned collection of ilastik components
Small repo for tracking compatible versions of the ilastik subprojects via git submodules.
lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation
Volume Slicing and Editing
ilastik-shell, applets, and workflows to string them together.
a generic C++ library for image analysis
CMake and other scripts to help build process of FlyEM software
very partial cython/python bindings for the lemon graph library
Automatic segmentation of electron microscopy volumes