sschivo/BMC_Biology2015
Paper for BMC Biology aimed at this article collection: http://www.biomedcentral.com/bmcbiol/series/beyondmendel
Developer Profile
sschivo
Discovered public repositories for sschivo in the GitHub catalog.
sschivo/ANIMO_Manual
The manual for ANIMO 3
sschivo/Paper_FORTE2015
Paper for FORTE 2015 http://discotec2015.inria.fr/forte-2015-call-for-papers/
sschivo/ANIMO_old_v3
Partially revised version of ANIMO to make it work with Cytoscape 3. Most of the work here consists in adding the latest (Apr 30 2014) version of ANIMO "dev" to a skeleton student project.
sschivo/Paper_SynCoP2014
Paper for the workshop SynCoP 2014 http://lipn.univ-paris13.fr/SynCoP2014/submission.php
sschivo/ANIMO_old_v2
New version of ANIMO, based on ANIMO_dev
sschivo/Paper_BMC_BioInfo
Paper for BMC Bioinformatics, based on the rejected paper for Oxford Bioinformatics
sschivo/Gene_paper
Paper for Gene journal about the process to get from data to an ANIMO model
sschivo/Paper_IEEE_BIBE2012_Journal
Paper for the IEEE Journal of Biomedical and Health Informatics
sschivo/Paper_Oxford_BioInfo2013
Paper on ANIMO to be submitted to Oxford BioInformatics
sschivo/IKNAT
Probably useless copy of INAT_legacy. Still, kept for archiving purpose only. No development here.
sschivo/INAT_legacy
The "oldest" version of ANIMO: it was called INAT. This is kept just for archive, not developed anymore.
sschivo/ANIMO_base
"Official" version of ANIMO: the one presented in paper BIBE 2012 (and journal extended version)
sschivo/ANIMO_old
Older version of ANIMO, using concentration and activity levels as separate values.
sschivo/ANIMO_old_v1
"Development" version of ANIMO: introduces (among other things) the support for "boolean-like" networks, a reactant-centered model and basic model checking with user interface. Extension for multi-core model checking is under way.