srobb1/GBrowse
the Generic Genome Browser
Developer Profile
srobb1
Discovered public repositories for srobb1 in the GitHub catalog.
srobb1/WP_Notebook
wordpress plugins created and modified by Sofia
srobb1/primer3_tab
cgi scripts for a very simple primer3 interface and parsing output to tab-delimited
srobb1/RT-PCR_primers
use a seqFeatureStore database to create sequence to use with Primer3 for primers that span exons
srobb1/tools
A collection of tools to analyze specific datasets
srobb1/mTEA
Mosquito TE Annotation
srobb1/primerChecker
check that student primers hit the correct spot in the genome
srobb1/findPackMule
Uses TIRs of a Mule to blast to the genome to see if the TE has picked up any other genomic sequence
srobb1/PFB2012
Code and samples from lecture and review sessions
srobb1/RelocaTE
Find the locations of TEs using the TSD in unassembled short reads by comparing to a closely related reference genome assembly
srobb1/scripts_by_sofia
my scripts