sjneph/mss
All Maximal Scoring Subsequences algorithm
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All Maximal Scoring Subsequences algorithm
network-motifs
Convert an integer factorization problem into a boolean SATISFIABILITY problem.
An efficient modwt wavelets package. This isn't the usual discrete wavelet transform found in, for example, the gsl but an extended set of algorithms designed to overcome some problems with the usual discrete wavelet transform.
Discrete HMM
Streaming plotting programs: scatterplot, histogram, sparkline, and timeline