sjackman/DWGSIM
Whole Genome Simulator for Next-Generation Sequencing
Developer Profile
sjackman
Discovered public repositories for sjackman in the GitHub catalog.
sjackman/htslib
C library for high-throughput sequencing data formats. This is the official repository.
sjackman/homebrew-cask
a friendly homebrew-style CLI workflow for the administration of Mac applications distributed as binaries
sjackman/homebrew-desc
Searchable descriptions for Homebrew formulas
sjackman/bowtie2
A fast and sensitive gapped read aligner
sjackman/BEETL
BEETL
sjackman/white-spruce-organelles-paper
:evergreen_tree: Organellar Genomes of White Spruce (Picea glauca)
sjackman/2013-11_sfu
Supporting documents for talk and workshop for SFU Statistics and Actuarial Science
sjackman/playground
A playground for experimentation
sjackman/2013-davis-assembly
Public repository.
sjackman/tabtools
Scripts to manipulate tab-delimited data
sjackman/pgcpdna-wgs-assembly
:evergreen_tree: Analyze plastid DNA (cpDNA) of white spruce (Picea glauca)
sjackman/samskrit
Tools to manipulate SAM and BAM files
sjackman/wiki
My notes
sjackman/debruijn
de Bruijn graph construction tool
sjackman/dbgfm
FM-index representation of a de Bruijn graph
sjackman/sjackman.github.io
The personal web site of Shaun Jackman
sjackman/IGV
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
sjackman/bam-readcount
count DNA sequence reads in BAM files
sjackman/sickle
Windowed Adaptive Trimming for fastq files using quality
sjackman/bioawk
BWK awk modified for biological data
sjackman/snoove
Create a dendrogram from genome sequencing data
sjackman/cpsc540-project
CPSC 540 Term Project
sjackman/homebrew-tap
Personal formulae for the Homebrew package manager
sjackman/stat540-project
STAT 540 group project
sjackman/fastgtools
Tools to manipulate FASTG files
sjackman/fastascripts
Manipulate FASTA files
sjackman/scikit-learn
scikit-learn: machine learning in Python
sjackman/rosalind
Rosalind solutions in Haskell
sjackman/homebrew-science-deprecated
:microscope: Scientific formulae for the Homebrew package manager
sjackman/abyss-activity
ABySS learning activity
sjackman/resume
PhD graduate in bioinformatics, programmer, engineer
sjackman/sga
de novo sequence assembler using string graphs
sjackman/samtools
Public repository.
sjackman/mathiasbynens-dotfiles
.files, including ~/.osx — sensible hacker defaults for OS X
sjackman/abyss-scaffold-paper
Scaffolding a genome sequence assembly using ABySS
sjackman/bwa
Burrow-Wheeler Aligner
sjackman/bamtools
C++ API & command-line toolkit for working with BAM data