sirxqyang/python.el
Python's flying circus support for Emacs
Discovered public repositories for sirxqyang in the GitHub catalog.
Python's flying circus support for Emacs
An easy and sensitive method for narrow peak detection. The original method comes from “Lu, W., et al. (2006). A semi-automatic method for peak and valley detection in free-breathing respiratory waveforms. Medical Physics, 33(10), 3634–3636.” And I implemented this method into Python code.
change gene id, symbol and so on.
average profile for nucleosome positioning data
the project for detecting the TF binding site as exactly as the ChIP-exo
source code for data analysis of enhancer project
get all promoter region from TSS genome
transformation for bed bam and wig files
run macs automatically
bowtie processing for all the fastq files in a folder
three_positioning for preliminary analysis of nucleosome positioning
this script was developed to execute macs and bedtool command.
test suit for code management of large project