rjpbonnal/sinatra-cacher
Sinatra cache library. Simple and effective file-based caching. Caches routes, blocks, or HTML fragments. Sets ETag correctly. Automatic or manual tag generation. Easy cache clearing.
Developer Profile
rjpbonnal
Discovered public repositories for rjpbonnal in the GitHub catalog.
rjpbonnal/FALDO-paper
Public repository.
rjpbonnal/chef-modules
Installs Environment Modules for the dynamic modification of a user's environment via modulefiles.
rjpbonnal/Ruby-ElmBioInfo-Course
Ruby @ Elementi di Bioinformatica
rjpbonnal/torque_rm
TORQUE Resource Manager for Ruby. Submit, check and control your job directly from Ruby.
rjpbonnal/basespace-ruby-sdk
BaseSpace Ruby SDK provides an easy-to-use Ruby environment that enables developers to authenticate users, retrieve data, and upload data from/to the BaseSpace cloud.
rjpbonnal/basespace-ninja
Public repository.
rjpbonnal/basespace-dojo
Public repository.
rjpbonnal/R2RDF
Converting R Objects to RDF Triples
rjpbonnal/BioInterchange
Generates interchangeable RDF from non-RDF data sources.
rjpbonnal/sparql-bed
sparql against simple bed files without loading them into a triple store.
rjpbonnal/once-only
Execute scripts only once when input is unchanged
rjpbonnal/bioruby-table
Swiss knife of tabular data
rjpbonnal/FALDO
Feature Annotation Location Description Ontology
rjpbonnal/Fastool
Simple and quick FastQ and FastA tool for file reading and conversion
rjpbonnal/rails3-application-templates
Application templates for Rails 3.2 starter apps you can deploy in minutes.
rjpbonnal/bioruby-vis
Public repository.
rjpbonnal/homebrew
The missing package manager for OS X.
rjpbonnal/bioruby-ucsc-api
Ruby UCSC API: An API for the UCSC Genome Database
rjpbonnal/rubygems
Library packaging and distribution for Ruby.
rjpbonnal/bioruby-faster
A fast and simple parser for Fasta / FastQ files
rjpbonnal/testzoho
test zoho
rjpbonnal/thor
A scripting framework that replaces rake and sake
rjpbonnal/bioruby-foo
TODO: one-line summary of your gem
rjpbonnal/bioruby-biolinux
Meta package for BioLinux distribution
rjpbonnal/biogems.info
Tools for keeping track of biogems
rjpbonnal/bioruby-rdf
BioRuby objects in RDF
rjpbonnal/bioruby-all
BioRuby plugins: ALL
rjpbonnal/bioruby-core-ext
BioRuby plugins with dependencies to external C libraries or tools
rjpbonnal/bioruby-core
BioRuby core plugins
rjpbonnal/rubyvis
Ruby version of Protovis, a visualization toolkit.
rjpbonnal/jeweler
Opinionated tool for creating and managing Rubygem projects
rjpbonnal/bioruby-gex
BioRuby and Gene Expression, sef of funcitonalities to analyze gene expression data sets. Cufflinks Quantificaion and Differential Expression, RtPCR, Illumina etc...
rjpbonnal/bioruby-biogem-pap
Public repository.
rjpbonnal/bioruby-sradl
Explore or download the he Sequence Read Archive (SRA) with BioRuby
rjpbonnal/bioruby-samtools
Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-
rjpbonnal/samtools-ruby
Binder of samtools for ruby, on the top of FFI.
rjpbonnal/bioruby-ngs
This plugins is intended to wrap the common software used for Next Generation Sequencing data
rjpbonnal/bioruby-full
This version of BioRuby install BioRuby, BioGem and a list of plugins.
rjpbonnal/bioruby-kb-illumina
Gene expression Illumina Annotations, Humans
rjpbonnal/bioruby-blessed
A metapackge for the accepted plugins/module from the BioRuby Developer Team
rjpbonnal/bioruby-gem
BioGem helps Bioinformaticians start developing plugins/modules for BioRuby creating a scaffold and a gem package
rjpbonnal/Ruby-Generic-Input-STDIN-Files
Easy way to handle inputs on Ruby scripts, dosent matter if you input a single file or multiple files or stdin.
rjpbonnal/ActiveRDF
Object oriented RDF in Ruby
rjpbonnal/bioruby-plugin-graphics
Bio::Graphics is a ruby library for visualizing annotations on chromosomes
rjpbonnal/bioruby
bioruby
rjpbonnal/bioruby-plugin-bigbio
Big data bioinformatics repository