phenoscape/ontotrace
Tool for querying a local copy of the Phenoscape KB and generating an inferred presence-absence data matrix, for a given taxon and anatomy specification.
Developer Profile
phenoscape
Discovered public repositories for phenoscape in the GitHub catalog.
phenoscape/kb-data-extracts
Queries (primarily in SPARQL) for data extraction from the Phenoscape KB
phenoscape/phenoscape-kb-ui
Phenoscape KB web user interface.
phenoscape/phenoscape-kb-services
Web services application for the Phenoscape RDF knowledgebase.
phenoscape/owlet
A little OWL in SPARQL.
phenoscape/vue2owl
Convert a VUE document to an OWL ontology.
phenoscape/scowl
A Scala DSL for programming with the OWL API.
phenoscape/skeleton-image-annotation
Reference images for the vertebrate skeleton annotated with Uberon terms.
phenoscape/phenoscape-builder
Build scripts for generating the Phenoscape RDF knowledgebase.
phenoscape/charaparser-unsupervised
Java implementation of the unsupervised bootstrapping algorithm used within the CharaParser application.
phenoscape/CMAPOBO
Tool for generating obo ontology files from Lifemap files generated by the CMAP tool
phenoscape/phenoscape-owl-tools
OWL-based reasoning and data processing utilities for assembling the Phenoscape RDF knowledgebase.
phenoscape/phenoscape-data
NeXML data files annotated by Phenoscape curators.
phenoscape/phenoscape.github.com
Phenoscape website
phenoscape/phenoscape-kb-rdf-data
RDF/XML serialization of the Phenoscape RDF knowledgebase.
phenoscape/synctool-oboedit
Synchronization tool for OBO-Edit. This plugin is being obsoleted by mappings provided by the Uberon project.
phenoscape/Phenex
Phenex is an application for annotating character matrix files with ontology terms using the Entity-Quality syntax for describing phenotypes.
phenoscape/phenoscape-nlp
Source for the CharaParser application, which uses natural language processing to propose EQ-based phenotype annotations.
phenoscape/ontophenotype-eol
"Export ontology-based phenotype descriptions to the Encyclopedia of Life" GSOC project, for the OBD-based Phenoscape knowledgebase.
phenoscape/PhenoscapeWeb
Web application for exploring the OBD-based Phenoscape Knowledgebase.
phenoscape/PhenoscapeDataLoader
Data processing utilities for assembling the legacy OBD-based Phenoscape knowledgebase.
phenoscape/Phenotype-Matching-Queries
Queries on the OBD-based Phenoscape KB to suggest possible matching phenotypes and profiles (sets of phenotypes).
phenoscape/PhenoscapeOBD-WS
Phenoscape data services web application for the legacy OBD-based knowledgebase.