pennatula/pennatula.github.com
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Developer Profile
pennatula
Discovered public repositories for pennatula in the GitHub catalog.
pennatula/write-good
Naive linter for English prose
pennatula/FYI
Find your interactions in PathVisio.
pennatula/reactomeComplexResolution
A quick fix to resolve Reactome complexes for the conversion to GPML
pennatula/RWikiPathways
R package to connect to the WikiPathways web service and the SPARQL endpoint of WikiPathways
pennatula/SBML-importer-plugin
SBML importer Plugin for PathVisio allows researchers to visualize and overlay data on the same pathway models which they use in simulation experiments
pennatula/Layouts
A PathVisio plugin which implements several layout algorithms. Currently implemented layouts include, SBML Layout (http://sbmllayout.sourceforge.net/SBMLLayout/Welcome.html) and Force directed Layout (http://opentutorials.cgl.ucsf.edu/index.php/Tutorial:Introduction_to_Cytoscape#Force-Directed_Layout)
pennatula/PathVisioWithInteractionSupport
This version of the PathVisio (http://www.pathvisio.org/) application works with the new interaction annotation database. The annotation database can be created using the code from https://github.com/pennatula/InteractionDB.git.
pennatula/RPathVisio
R package for PathVisioRPC
pennatula/reactome2gpml-converter
Converts Reactome pathways to GPML format
pennatula/twitter-bootstrap-hover-dropdown
An unofficial Twitter Bootstrap plugin to enable Twitter Bootstrap dropdowns to activate on hover and provide a nice user experience.