pcarbo/b6d2muscle
R code implementing QTL mapping of hindlimb muscle weights in C57BL/6J ("B6") x DBA/2J ("D2") mouse advanced intercross line.
Developer Profile
pcarbo
Discovered public repositories for pcarbo in the GitHub catalog.
pcarbo/vardemo
Small demonstration of importance sampling, Laplace's method and a variational approximation for logistic regression
pcarbo/breedail
R code to select breeders from an advanced intercross line so that they minimize inbreeding in the offspring
pcarbo/kyoto
Module for 2014 Kyoto Course on Bioinformatics
pcarbo/lbfgsb-matlab
A MATLAB interface for L-BFGS-B
pcarbo/QTLRel
R package for mapping quantitative trait loci in experimental crosses such as advanced intercross lines where relatedness among individuals should not be ignored.
pcarbo/lgsmfear
R code implementing QTL mapping of fear conditioning traits in LG/J x SM/J mouse advanced intercross line.
pcarbo/bmapathway
MATLAB source code to accompany the PLoS Genetics paper, "Integrated enrichment analysis of variants and pathways in genome-wide association studies indicates central role for IL-2 signaling genes in type 1 diabetes, and cytokine signaling genes in Crohn's disease".
pcarbo/varbvs
Large-scale Bayesian variable selection for R and MATLAB.