nkrumm/livebooth
A simple photobooth server and webapp. Watches an incoming folder and serves to web. Built with node + react.js.
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A simple photobooth server and webapp. Watches an incoming folder and serves to web. Built with node + react.js.
Code + Pipelines for the NDAR ASD pipelines
NGiNX HTTP server
S3proxy provides a simple REST-interface to files and keys stored on the AWS S3 service.
Personal blog + website, made using jekyll and skeleton
frFAST: (frankenFAST), a lightweight pipeline designed to calculate read-depth across an exome or genome using the mrsFAST mapper
CoNIFER (Copy Number Inference From Exome Reads) can discover CNVs from exome read-depth data. See Krumm et al., 2012 (Genome Research) for more information.
StarCluster is an open source cluster-computing toolkit for Amazon's Elastic Compute Cloud (EC2).
the RATTLEBUS
NGS pipeline based on the python module ruffus
CoNIFER Tools - Tools for improving call generation, annotation and filtering. Used in conjuction with CoNIFER (Copy Number Inference From Exome Reads)
GAUSS: Genome Annotation Umbrella for SNVs and Structure
Fast Python Bloom Filter using Mmap