misshie/bioinformatics
Tools for bioinformatics
Developer Profile
misshie
Discovered public repositories for misshie in the GitHub catalog.
misshie/xCAT_ja
xCAT information in Japanese
misshie/hgvd2annovar
Convert a HGVD table file to an ANNOVAR generic DB file
misshie/avsummary
GATK & ANNOVAR workflow tool
misshie/UCSC2VCF
Convert UCSC dbSNP to VCF files
misshie/bioruby-dbsnp
Utilities to handle dbSNP bitfield information
misshie/bioruby-ucsc-api
Ruby UCSC API: An API for the UCSC Genome Database
misshie/bioruby-genomic-interval
a BioRuby plugin: handling genomic interavals and overlaps
misshie/Workflows
Pwrake for bioinfomatics workflows using GATK and Dindel
misshie/bioruby-rakehelper
A BioRuby plugin: helper methods simplifying rakefiles
misshie/UCSCBin
Utilities for UCSC Bioinformatics Genome Browser ( http://genome.ucsc.edu ) including calculation of a BIN index from a genomic interval to speed-up SQL queries, and conversion between 1-based full-closed (for humans) and 0-based half-open (for machienes) intervals