minillinim/StoreM
StoreM
Developer Profile
minillinim
Discovered public repositories for minillinim in the GitHub catalog.
minillinim/pyseq
pyseq
minillinim/symCalc
symCalc
minillinim/stackedBarGraph
stackedBarGraph
minillinim/ParseM
ParseM
minillinim/GroopM_test_data
Data used for validating GroopM
minillinim/bioFuzz
bioFuzz
minillinim/disproportionateWalrus
Strip low copy number kmer containing reads from fastX read files
minillinim/taintedSwallow
Parse nucmer output to create contig associations
minillinim/outstandingKnife
automagic pypi/Github project creationator
minillinim/remoteMoose
Password management for neanderthals
minillinim/minillinim.github.com
Purdy pages for mwa
minillinim/vitalHarshArm
Python library for creating memory efficient C++ classes
minillinim/ellipsoid
Example code for enclosing points in an elipsoid
minillinim/bam2fpkc
Abundance profile construction for contigs or bins
minillinim/randoms
random stuff
minillinim/readSelector
Randomly subsample N [un]paired reads from source [zipped] file[s]
minillinim/sammy
Stupidly simple short read simulator
minillinim/SimpleHMMER
Super simple wrapper for running hmmer3 and parsing the output
minillinim/pypi
Create all the files one needs to get your code pypiable
minillinim/scriptShed
sequence manipulation scripts that are actually useful
minillinim/cRazyscripts
Scripts for manipulating data from the cazy db
minillinim/BamTyper
Working with paired reads in BAM format
minillinim/bioruby-kmer_counter
A biogem for counting small kmers for fingerprinting nucleotide sequences
minillinim/explodeGenbank
Separate a multiple genbank file into separate records
minillinim/ionPairer
create a rough scaffold using ion torrent MP reads
minillinim/profile2value
Convert a descriptive profile into a single value between 0 -> 1 using PCA
minillinim/callOrfs
wrapper for computational ORF calling programs
minillinim/gff2fasta
convert a gff file into fasta format
minillinim/CUB
Barcode metagenomic contigs based on codon usage profiling
minillinim/mungeGG
Join a taxonomy to the greengenes database
minillinim/MDJ
Jukebox script for XBMC -> very beta
minillinim/templates
A set of templates which make coding more funner!
minillinim/sam2fpkg
Convert a sam mapping file and gff3 annotation file to find transcriptomic level in microbial transciptomic data sets
minillinim/Normaliser
Perl program for normalising ecological data tables
minillinim/APP
Ace Pyrotag Pipeline - wrapper for QIIME and R - interfaces with PyroDB
minillinim/VEB
Virtual Machine Environment originally set up for the ACE group
minillinim/drupal_sync
sync a dev and production drupal installation
minillinim/PyroDB
Development files for a pyrotag database project written to integrate with drupal 6.20
minillinim/mikezbioscripts
A collection of scripts that I used to use. Abandoned now, use them at your own peril...
minillinim/SaSSY
Short read assembler for illumina-type DNA sequence data