micahcc/BrainID
This was my masters thesis research. It is basically a tool for using the particle filter to estimate parameters of the balloon model of the BOLD signal from an fMRI Image.
Developer Profile
micahcc
Discovered public repositories for micahcc in the GitHub catalog.
micahcc/cppMatrixTools
This is a C++ library, using EIGEN to estimate large, sparse partial correlation matrices, using activate shooting.
micahcc/mathparse
Quick math-parsing algorithm based on c++ regular expressions.
micahcc/Pipelines
Vanilla Version of WashU Piplines
micahcc/ctest
Just a bunch of random c++ and c tests.
micahcc/waf_etest
I would like waf to have testing that takes args, or perhaps even input files. This will eventually be that.
micahcc/imageViewer
Web-based medical image viewer. Who knows if it will work.
micahcc/cppConvexOptimizers
Convex optimization algorithms written in C++. Initially this will include BFGS, LBFGS and Gradient Descent. Minimal deps (TCLAP, EIGEN)
micahcc/cppPlot
A C++ library for plotting basic functions and arrays to TGA file. TGA is used because it is a very simple image file format. No external dependencies.
micahcc/unordered_buffer
Cache that uses map-like interface, with templates.
micahcc/npl
'Neuro' Programs and Libraries to aid in brain imaging.
micahcc/FullBoreSkullStrip
A skull stripping algorithm based on registration to an atlas.
micahcc/BrainCircle
Brain Circle Visualization
micahcc/NIfTIMind
Reference implementation of NIfTI Mind extensions (ref: http://www.ncbi.nlm.nih.gov/pubmed/20206274). The original version was not in the public domain, so this version is based on the nifti reference implementation, and in the public domain.
micahcc/circos-brain
This is a modified version of circos with a run script that has a separate output file.
micahcc/i3-wm-scripts
i3 Window Manager Scripts