lskatz/portableBioinformatics
A set of tools
Developer Profile
lskatz
Discovered public repositories for lskatz in the GitHub catalog.
lskatz/biophp
Lee Katz's BioPHP
lskatz/bio-js
Lee Katz's original bio-javascript library
lskatz/App-perlbrew
Manage perl installations in your $HOME
lskatz/EDLB_test
A test for EDLB to mess around with github
lskatz/spark
▁▂▃▅▂▇ in your shell.
lskatz/CG-Pipeline
Genome assembly/prediction/annotation pipeline for the Linux command line
lskatz/lyve-KSNP
a set of wrapper scripts for KSNP
lskatz/lyve-MLST
A module for typing whole genomes, given a BigsDB-style MLST database.
lskatz/callsam
Call variants on sam files
lskatz/lskScripts
A placeholder for all my random scripts. Some scripts might eventually graduate and go to their own projects, so don't be surprised if anything leaves in the future.
lskatz/Schedule--SGELK
Perl module for scheduling tasks, with only using qsub/qstat/qdel. A very portable scheduler.
lskatz/lyve-SET
:dancer: :palm_tree: LYVE-SET, a method of using hqSNPs to create a phylogeny, especially for outbreak investigations
lskatz/biophp-at-ga-tech
Bioinformatics tools for PHP