lmmx/embed-n.js
Fun little Javascript program to view PDFs "n-up" in the browser
Discovered public repositories for lmmx in the GitHub catalog.
Fun little Javascript program to view PDFs "n-up" in the browser
A Google Chrome extension that modifies journal links so they give you the F'ing PDF.
R functions for reading and writing from the system clipboard
My dotfiles
Carl Kingsford and Rob Patro. Reference-based compression of short-read sequences using path encoding. Under review (2014). v-0.6.3
Website for the Open Research Glossary (currently at http://www.righttoresearch.org/resources/OpenResearchGlossary/index.shtml)
Get metadta, fulltexts or fulltext URLs of papers matching a search query
Automatic video subtitle generation
Publicly viewable files from an analysis of gene expression time series data on ArrayExpress
Uploading for reference from SVN repository https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ArrayExpress/
Pics 'n' tricks
Storing and cleaning up life at low Reynold's number (found online without proper formatting)
Transcripts of Clojure-related talks
Convert a Google Drive Document to a markdown.
Public repository.
Supplementary source code from Menche et al (2015) Uncovering disease-disease relationships through the incomplete interactome
Waveform package that accompanied Amariei et al. (2014) doi: 10.3389/fcell.2014.00040
'Bot' R code to parse Google Scholar Alerts emails and send individual papers to Twitter
Storing my Feedly OPML and a tabular listing
Data analysis and visualisation using Home Office / Office for National Statistics datasets on police workforce size, population size, and taser use for 43 UK law enforcement territorial regions
Post-genome bio discussion paper references and figures
obscure technical resolutions re: errors, installation quirks, custom setups etc.
Command line tool to manage Kanban boards
Responsive R script to automate GO annotation incorporation into TSV files
PDBe PISA download scripts
Super simple Chrome extension to save all files in open tabs (e.g. PDFs)
CSS etc. for biochemistri.es and naivelocus.com
JS journal abbreviation generator (MEDLINE)
JS to add a "Crop and Print" option to the Acrobat File menu for various bioscience journals.
Populating a simple library of scholarly article titles and their RSS feed URLs with bibliographic data, by giving it a structured schema in Javascript.
Web scraper to pull metadata (specifically corresponding author) from pages where unavailable through Pubmed's eUtils XML file. Work in progress 2013 / abandoned in 2014 for more useful projects.
Map of catenane, rotaxane and molecular machine researchers worldwide