leekgroup/derSoftware
Analyses for derfinder software paper
Developer Profile
leekgroup
Discovered public repositories for leekgroup in the GitHub catalog.
leekgroup/tablemaker
Preprocessing software for prepping Cufflinks output for Ballgown
leekgroup/enrichedRanges
enrichedRanges
leekgroup/derfinderPlot
Plotting functions for derfinder results
leekgroup/derfinderHelper
Helper package for derfinder
leekgroup/testsetbias
Materials to reproduce test set bias analysis.
leekgroup/polyester_code
code used for analysis presented in polyester paper
leekgroup/ballgown_code
analysis code used in Ballgown paper
leekgroup/regionReport
Generate HTML report for a set of genomic regions or DESeq2/edgeR results
leekgroup/locfdr-python
Python implementation of Efron, Turnbull, and Narasimhan's R function locfdr v1.1-7, which computes local false discovery rates. See http://cran.r-project.org/web/packages/locfdr/ for more information.
leekgroup/derfinder
R package for DER Finder, a method for differential expression analysis of RNA-seq data
leekgroup/Set
Set package