kashmatic/tutorial
Public repository.
Developer Profile
kashmatic
Discovered public repositories for kashmatic in the GitHub catalog.
kashmatic/first_app
Public repository.
kashmatic/try_git
Public repository.
kashmatic/mGSV
Multiple Genome Synteny Viewer
kashmatic/hello_gem
Public repository.
kashmatic/CGCV
Are you curious how a gene cluster is conserved across multiple genomes? We have developed a web-based Comparative Gene Cluster Viewer that allows you to upload the sequences of your favourite gene cluster (e.g. an operon in Bacteria), perform dynamic search against your choice of genomes and interactively visualize the conservation of the gene cluster via our novel multi-genome browser. Our approach avoids the time-consuming and often inaccurate genome wide pre-computing commonly used in other existing tools. For more details, please visit the About page.
kashmatic/BOV
BLAST Output Visualization Tool (BOV) allows users to interactively visualize the BLAST high-scoring segment pairs between query and hit sequences for dissecting complex matching patterns. This software is aimed at facilitating users interested in identifying regions of colinearity, duplication, translocation, and inversion using the BLAST program.