jtprince/binneroc
Bins things in constant time, O(c) or O(1).
Discovered public repositories for jtprince in the GitHub catalog.
Bins things in constant time, O(c) or O(1).
Tools for bioinformatics
Some simple add-ons for the OS independent iclicker software by siefkenj
A tutorial for using Gtk3 from ruby
manages and links dotfiles and environment files and is github aware
environment config files
tools for dealing with BYU's learning suite software and gradebook (integrating with iclicker, etc.)
Unoriginal option parsing in the spirit of trollop, micro-optparse, commander, and optitron.
Not exactly like trine3. We are building this game for fun.
using a validated YAML file, creates your vita
reads the output of an LDS home/visiting teaching assignments pdf
Adds a simple interface on top of rserve-client
Rename id3 tags
simpler ("Simple R") is a lightweight wrapper of R (really Rscript) inspired by the gnuplot and rsruby gems.
mspire library supporting in-silico calculations for mass spec data (protein digestion, peptide fragmentation, etc.)
yet another mass spec viewer. uses rubygame and FFI-OpenGL for simple scripting and FFI-Inliner for blazing fast speed. Meant to run mzML and mzIdentML.
A unit handling library for ruby
A library of molecules for scientific calculations in Ruby.
Numeric arrays modeled after numpy and narray that are easily modifiable using FFI-Inliner.
"bibliography in vim and yaml" is a lightweight bibliographic management system. Create bibliographies and citations with simple tools.
Gives a very nice and informative alignment of partially overlapping DNA sequencing reads using bioruby and clustalw.
Hydrogen bondifier calculates hydrogen bond inter-molecular distances and distance to surface from PDB files using pymol and BioRuby
an mspire library for calculating error rates (false discovery rates) in mass spec proteomics
very terse syntax for testing/specing ala Test::More
An mspire library that is merely a template for other mspire libraries
mspire library for working with fasta and related files
mspire library for working with mascot files
mspire library for working with xcalbur generated data (.RAW files)
shared core library for mspire
pure ruby implementation of NArray
Makes histograms from data. Features: auto-bin (Scott, Sturges, FD, etc), multiple datasets, and weights.
An mspire library for working with LC/MS runs