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Developer Profile

jtprince

Discovered public repositories for jtprince in the GitHub catalog.

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jtprince/learning_suite

tools for dealing with BYU's learning suite software and gradebook (integrating with iclicker, etc.)

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jtprince/optrite

Unoriginal option parsing in the spirit of trollop, micro-optparse, commander, and optitron.

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jtprince/simpler

simpler ("Simple R") is a lightweight wrapper of R (really Rscript) inspired by the gnuplot and rsruby gems.

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jtprince/ms-in_silico

mspire library supporting in-silico calculations for mass spec data (protein digestion, peptide fragmentation, etc.)

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jtprince/terrapin

yet another mass spec viewer. uses rubygame and FFI-OpenGL for simple scripting and FFI-Inliner for blazing fast speed. Meant to run mzML and mzIdentML.

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jtprince/numrb

Numeric arrays modeled after numpy and narray that are easily modifiable using FFI-Inliner.

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jtprince/bivy

"bibliography in vim and yaml" is a lightweight bibliographic management system. Create bibliographies and citations with simple tools.

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jtprince/dna_sequence_aligner

Gives a very nice and informative alignment of partially overlapping DNA sequencing reads using bioruby and clustalw.

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jtprince/hydrogen_bondifier

Hydrogen bondifier calculates hydrogen bond inter-molecular distances and distance to surface from PDB files using pymol and BioRuby

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jtprince/ms-error_rate

an mspire library for calculating error rates (false discovery rates) in mass spec proteomics

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jtprince/histogram

Makes histograms from data. Features: auto-bin (Scott, Sturges, FD, etc), multiple datasets, and weights.

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