josephhughes/phlawd
phylogenetics with databases
Developer Profile
josephhughes
Discovered public repositories for josephhughes in the GitHub catalog.
josephhughes/perpetually-updated-trees
Public repository.
josephhughes/seqmutprobs
R package for screening sequence data for mutations-of-interest
josephhughes/metAMOS
A metagenomic and isolate assembly and analysis pipeline built with AMOS
josephhughes/HCVtoolbox
Tools and scripts used in various HCV projects
josephhughes/OpenAccess_EPUB
Publishing OpenAccess journalism in the EPUB format
josephhughes/PyAnyw
A testing repo for Python Anywhere
josephhughes/btctools
Beyond the consensus NGS tools
josephhughes/MERS-Cases
Public repository.
josephhughes/bio-phylo
Phyloinformatic analysis using Perl
josephhughes/MicroApp
Android mobile app to integrate a laboratory management system with Google Docs
josephhughes/papara_nt
new codebase of the PaPaRa algorithm
josephhughes/ivy_mike
self-contained c/c++ libraries derived from my c_tools project
josephhughes/taxtastic
Create and maintain phylogenetic "reference packages" of biological sequences.
josephhughes/xbase
XBASE - a database and web framework for bacterial genomics and next-generation sequencing
josephhughes/bioperl-live
Core BioPerl 1.x code
josephhughes/Sequence-manipulation
A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats
josephhughes/PrepPhyloViz
preparing files for phyloviz software