johnstantongeddes/MtGIRAFFE
Script for identification of haplotype clusters in Medicago genes.
Developer Profile
johnstantongeddes
Discovered public repositories for johnstantongeddes in the GitHub catalog.
johnstantongeddes/bcbio-nextgen
Validated, scalable, community developed variant calling and RNA-seq analysis
johnstantongeddes/slidify
Generate reproducible html5 slides from R markdown
johnstantongeddes/CCThermBe
Analysis of thermal effects of forager caste development
johnstantongeddes/slidify-reveal-test
Test of slidify using reveal.js framework
johnstantongeddes/choosealicense.com
A site to provide non-judgmental guidance on choosing a license for your open source project
johnstantongeddes/toolbox
Random useful scripts
johnstantongeddes/ApTranscriptome
Transcriptome assembly and gene expression analysis for *Aphaenogaster* ant species
johnstantongeddes/eco-centennial-paper
Manuscript for Centennial paper in Ecology
johnstantongeddes/ecobiblatex
Biblatex styles for ecology journals
johnstantongeddes/sim-transcriptome
Simulation of transcriptome assembly for gene expression analysis
johnstantongeddes/climate-cascade
Repository for NSF Dimensions of Biodiversity Award #1136717
johnstantongeddes/aphaenofest2013-reproducible-research
Presentation on reproducible research for transcriptome assembly
johnstantongeddes/presentations
Presentations
johnstantongeddes/Mt-GCTA
Scripts used for [GCTA](http://www.complextraitgenomics.com/software/gcta/) analysis of Medicago data
johnstantongeddes/JSGtest
Public repository.
johnstantongeddes/linuxgems
A succinct cheat sheet for newbie linux coders and system administrators, documenting some of the more obscure and useful gems of linux lore. Intended to be viewed in emacs org-mode, or VimOrganizer, though any text editor will suffice.
johnstantongeddes/acorns-analysis
Example analysis of acorn data from Koenig and Knops (2013)
johnstantongeddes/johnstantongeddes.org
Website and lab notebook
johnstantongeddes/GAPIT
Public repository.
johnstantongeddes/mt-gapit
GAPIT pipeline for Medicago HapMap project