johandahlberg/ansible-elk
Ansible role for Elasticsearch ELK Stack
Developer Profile
johandahlberg
Discovered public repositories for johandahlberg in the GitHub catalog.
johandahlberg/ngi_reports
Code to generate reports for use by the NGI in SciLifeLab
johandahlberg/ansible_spark_openstack
Instructions and Ansible playbooks for deploying a Spark stand-alone cluster on OpenStack
johandahlberg/virtualbox-cluster
A (currently only 3 node) virtualbox cluster for quickly testing out things
johandahlberg/ExternalProcessExperiment
Public repository.
johandahlberg/SDashboard
A visualization app written in Shiny to show sequencing metrics
johandahlberg/role_hercules
Public Ansible role for deploying Hercules
johandahlberg/ngi_pipeline
Code driving the production pipeline at SciLifeLab (not yet in production)
johandahlberg/hairy-adventure
Base for the automation challenge at SNP&SEQ - let's see which automation system suite our needs best!
johandahlberg/hercules
Public repository.
johandahlberg/swingbeats
A little web app to get swing dance music playlists from spotify.
johandahlberg/vagrant-puppet-slurm
A playground for testing setting up a slurm cluster (for testing purposes only).
johandahlberg/uppsala-bioinformatics.se
My personal website
johandahlberg/sisyphus
Pipeline scripts for processing and QC of Illumina HiSeq and MiSeq data
johandahlberg/PiperWorkshop
Public repository.
johandahlberg/jvarkit
Java utilities for NGS
johandahlberg/tattoo
A show of Pipers - or a prototype for a project management system
johandahlberg/gyllenehjortentrivia
Ett litet webspel om Gyllene Hjorten trivia
johandahlberg/genomeresources
List of resource file used at the NGI platform
johandahlberg/jvar
jvar repo forked from https://code.google.com/p/jvarkit/
johandahlberg/BestPracticeSlides
Repo for the code used in the MolMed TechTalk about best practices in scientific computing.
johandahlberg/piper
A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (make sure you fork from there)
johandahlberg/bakka
akka + bams = bakka
johandahlberg/Splitter
Scala program for splitting files of some common bioinformatics formats (right now fastq.gz and bam)
johandahlberg/Scripts
My collection of (mostly) bioinformatics related scripts
johandahlberg/HelloGoogleMaps
Some prototyping for a google maps based andoid app.
johandahlberg/SnpSeqPipeline
Variant calling pipeline for the SNP&SEQ Technology Platform at Uppsala University
johandahlberg/gatk
GATK Official Release Repository