joaks1/joaks1.github.io
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joaks1
Discovered public repositories for joaks1 in the GitHub catalog.
joaks1/dirichlet-process-trees
Simple, interactive examples of Dirichlet process probability trees
joaks1/cv-jro
My CV.
joaks1/texmf-env
My tex environment
joaks1/crocodile-book-review
Public repository.
joaks1/sphinxcontrib-bibtex
Sphinx extension for bibtex style references.
joaks1/vim-env
My vim environment.
joaks1/biogeography-course
Materials for biogeography class
joaks1/SplitFreq
Compare split frequencies between collections of trees.
joaks1/subtex
Create journal-submission-ready files from a nested hierarchy of latex files and dependencies.
joaks1/pyule
CLI tool for simple calculations of rates and tree heights and lengths under Yule processes.
joaks1/applied-phylogenetics
Materials for an applied phylogenetics course
joaks1/msbayes-experiments
Analyses to assess the behavior of the comparative phylogeographic method, msBayes
joaks1/dpp-msbayes
A modification of the comparative phylogeographic method, msBayes
joaks1/PyMsBayes
PyMsBayes is a multi-processing Python API for approximate Bayesian computation
joaks1/abacus
Approximate BAyesian C UtilitieS
joaks1/phase_py
Python script for automating the phasing of diploid DNA consensus sequences.
joaks1/SeqSift
SeqSift is a python package for vetting, manipulating, and converting molecular sequence data.
joaks1/partition_summary
Python package for summarizing Bayesian posterior samples of DNA alignment partitions
joaks1/msbayes-hack
Modified versions of the acceptRej.pl PERL script from the msBayes package