jni/goatools
Python scripts to find enrichment of GO terms
Developer Profile
jni
Discovered public repositories for jni in the GitHub catalog.
jni/autopilot
Automatically schedule events and activities
jni/scikit-image-paper
Public repository.
jni/node
My solutions to the nodeschool.io lessons
jni/calc-demo
add numbers from the command line
jni/vis
Visualisation tools and wrappers for Python
jni/vlsci-jobs
Job scripts to use with SLURM
jni/vimrc
My vimrc file
jni/python-in-neuroscience-paper
Paper repository for Frontiers in Neuroinformatics: Python in Neuroscience II submission
jni/notebooks
Miscellaneous IPython notebooks.
jni/skeletons
Tools to explore skeletonisation methods in 3D
jni/aio
Solutions to the Australian Informatics Olympiad team training exercises
jni/genome-scripts
Various Python-based tools for analysing genome data
jni/cellom2tif
Python command line interface to convert Cellomics .C01 files to TIFF.
jni/slic-counter
Count fluorescent cells using SLIC superpixels.
jni/cafe
Centromere-associated fluorescence estimator
jni/gene-beacon
Find a transgene by sequencing out from the ends and matching to a reference genome
jni/gala
Automatic segmentation of electron microscopy volumes
jni/gel
GEL superpixels: iterative geodesic expansion of labels and recentering
jni/gobayes
GO-Bayes: a correction to Fisher's exact test when we lack priors
jni/networkx
Official NetworkX source code repository.
jni/scikit-learn
scikit-learn: machine learning in Python
jni/scikit-image
Image Processing SciKit (Toolbox for SciPy)
jni/viridis
A tree library for Python
jni/h5cat
Quick preview of HDF5 files on the command line
jni/synapse-geometry
Examine features of synapse geometry in EM segmentation data
jni/betamax
Estimating optimal sampling strategies for high-throughput screens
jni/ipython-config
A config file to keep up with the endless updates from the iPython team.
jni/gaest
Genetic algorithms to clutser expressed sequence tags
jni/statutes
Statistical utilities
jni/bashrc
My .bashrc file
jni/vigra
a generic C++ library for image analysis
jni/ray
Automatic segmentation of electron microscopy volumes