jeffhsu3/gemini
a lightweight db framework for disease and population genetics.
Developer Profile
jeffhsu3
Discovered public repositories for jeffhsu3 in the GitHub catalog.
jeffhsu3/snpscope
Compute overlap of SNPs with regulatory elements and export to CSV or the UCSC Genome Browser
jeffhsu3/MACS
MACS -- Model-based Analysis of ChIP-Seq
jeffhsu3/argweaver
Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
jeffhsu3/bioruby-ngs
This plugins is intended to wrap the common software used for Next Generation Sequencing data
jeffhsu3/nmatrix
Prototype numeric matrix library for Ruby via SciRuby
jeffhsu3/bsplines
Public repository.
jeffhsu3/topaz
A high performance ruby, written in RPython
jeffhsu3/llvmpy
Originally a github fork of the llvm-py repository from http://www.mdevan.org/llvm-py/index.html updated to work with LLVM 3.x. Since then it has changed significantly with multiple sub-projects.
jeffhsu3/edgepy
python based edgeR for learning and fun
jeffhsu3/htseq-copy
Public repository.
jeffhsu3/syte-1
A really simple but powerful packaged personal site that has social integrations like twitter, github, dribbble, instagram, foursquare, tumblr, last.fm, and much more...
jeffhsu3/_dotfiles
configuration files
jeffhsu3/VCF-Converter
Coverts VCF files from one reference to another.
jeffhsu3/Python-App.net-API-Wrapper
Python Wrapper for App.net's API
jeffhsu3/autopy
A simple, cross-platform GUI automation toolkit for Python.
jeffhsu3/biodas
A django tastypie implementation of a BioDAS server.
jeffhsu3/biopython
Official git repository for Biopython (converted from CVS)
jeffhsu3/panGEO
Convenience functions for loading GEO data into Panda Dataframes
jeffhsu3/d3py
a plottling library for python, based on D3
jeffhsu3/ipython
Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.
jeffhsu3/jeffQTL
Convenience functions for working with Karl Broman's R/QTL
jeffhsu3/dalliance
Interactive web-based genome browser.
jeffhsu3/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
jeffhsu3/statsmodels
Statsmodels: statistical modeling and econometrics in Python
jeffhsu3/genda
genda a genetics library in pandas
jeffhsu3/mimRNA
Useful functions to use with edgeR