inodb/2014-06-favorite-microbe
Presentation Flavobacterium psychrophilum
Developer Profile
inodb
Discovered public repositories for inodb in the GitHub catalog.
inodb/2014-06-lims-developers-workshop
ETT LIMS developers workshop
inodb/CONCOCT-test-data
A test dataset for CONCOCT
inodb/blog-inopm
Blog for ino.pm
inodb/dotfiles
Dotfiles I use
inodb/CONCOCT
Clustering cONtigs with COverage and ComposiTion
inodb/2014-5-metagenomics-workshop
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
inodb/2014-3-lims-presentation
Presentation of LIMS for Ettema Lab
inodb/masmvali-publication
MASMVALI Publication
inodb/bioinfo-outreach
Presentations, posters and workshop site for my homepage
inodb/django-import-export
Django application and library for importing and exporting data with admin integration.
inodb/facs
Fast and Accurate Classification of Sequences using Bloom filters
inodb/gefes
Genome Extraction From Environmental Sequencing
inodb/2013-metagenomics-workshop-gbg
Metagenomic Workshop Göteborg
inodb/bsc-thesis
BSc thesis - CollaMusica - Music composition in a distributed collaborative environment
inodb/ProBin
A program for binning metagenomic contigs to taxonomic rank, with possibility to use correlation between multiple samples.
inodb/assembly-workshop
Assembly workshop at SciLifeLab
inodb/msc-thesis
Public repository.
inodb/snakemake-parallel-bwa
A Snakefile to parallelize bwa.
inodb/notebooks
Ipython notebooks
inodb/gnu-make-job-scheduler
A library for GNU make to schedule rules as jobs with qsub or sbatch
inodb/khmer
in-memory k-mer counting
inodb/masmvali
MASMVALI (Metagenomic ASseMbly VALIdation) is an assembly validator for metagenomics with known reference genomes.
inodb/biorhino-tools
A collection of simple bioinformatic scripts
inodb/snakemake-uppmax-demo
Demonstrates the use of snakemake compared to GNU make on Uppmax with a simple example
inodb/metassemble
Scripts to run several metagenomics assembly programs