ilveroluca

Discovered public repositories for ilveroluca in the GitHub catalog.

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ilveroluca/bdg-formats

Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.

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ilveroluca/bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

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SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data.

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ilveroluca/Hadoop-BAM

Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework with the Picard SAM JDK, and command line tools similar to SAMtools.

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