idiv-biodiversity/cdhit
Automatically exported from code.google.com/p/cdhit
Developer Profile
idiv-biodiversity
Discovered public repositories for idiv-biodiversity in the GitHub catalog.
idiv-biodiversity/blasr_libcpp
Public repository.
idiv-biodiversity/blasr
BLASR: The PacBio® long read aligner
idiv-biodiversity/bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
idiv-biodiversity/abyss
de novo sequence assembler
idiv-biodiversity/STAR
RNA-seq aligner
idiv-biodiversity/bowtie
An ultrafast memory-efficient short read aligner
idiv-biodiversity/cufflinks
Public repository.
idiv-biodiversity/bowtie2
A fast and sensitive gapped read aligner
idiv-biodiversity/bcftools
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
idiv-biodiversity/revbayes
Public repository.
idiv-biodiversity/standard-RAxML
Public repository.
idiv-biodiversity/bedtools2
A powerful toolset for genome arithmetic.
idiv-biodiversity/partitionfinder
PartitionFinder discovers optimal partitioning schemes for DNA sequences.
idiv-biodiversity/RAPSearch2
Reduced Alphabet based Protein similarity Search
idiv-biodiversity/htslib
C library for high-throughput sequencing data formats
idiv-biodiversity/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
idiv-biodiversity/sickle
Windowed Adaptive Trimming for fastq files using quality
idiv-biodiversity/submit-scripts
collection of ready-to-use submit scripts for high performance computing
idiv-biodiversity/mpi-info
small program checking MPI
idiv-biodiversity/pretty-accounting
toolkit for pretty RJMS / DRMS accounting
idiv-biodiversity/ckit
distributed monitoring for resource and job management systems