hammerlab/concordance
Concordance between variant callers
Discovered public repositories for hammerlab in the GitHub catalog.
Concordance between variant callers
Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly
Public repository.
Use somatic mutations to choose a personalized cancer vaccine (tumor-specific immunogenic peptides)
Scalable genome variant analytics using the ADAM project
Public repository.
Diagnostic Scripts for an NGS Pipeline
A Variant Caller, Distributed
Predicting immunogenicity of short peptides
A tool for exploring high-dimensional RNA sequences from in vitro selection
A genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.