faircloth-lab/uce-probe-design
Code for designing UCE probes
Developer Profile
faircloth-lab
Discovered public repositories for faircloth-lab in the GitHub catalog.
faircloth-lab/sh_t
parallel, automated SH-testing
faircloth-lab/exa-helpers
Public repository.
faircloth-lab/bird-db
the application and database underlying birds.faircloth-lab.org
faircloth-lab/protocols-libprep
illumina library prep protocol
faircloth-lab/cookiecutter-protocols
a cookiecutter template for a protocols package
faircloth-lab/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
faircloth-lab/basespace
An alternative python mechanism to access the Illumina BaseSpace API
faircloth-lab/conda-recipes
bioinformatics program recipes for the conda package manager
faircloth-lab/uce-finder
Public repository.
faircloth-lab/colony2-helpers
code to help run colony2
faircloth-lab/meta
Public repository.
faircloth-lab/mp-est
modified version of mpest with CLI parameters
faircloth-lab/chopsuey
Virtual digests of DNA
faircloth-lab/uce-probe-sets
Repository of different outgroup databases for use building UCE trees
faircloth-lab/msatcommander-gs
A grown-up version of msatcommander for genome-scale data
faircloth-lab/dimensions
Code associated with our NSF Dimensions of Biodiversity grant
faircloth-lab/splitaake
demultiplex massively parallel sequencing data
faircloth-lab/data-theme
Public repository.
faircloth-lab/blog-theme
This repo has moved to better place - the_minimum theme for jekyll
faircloth-lab/phyluce
software for UCE (and general) phylogenomics
faircloth-lab/illumiprocessor
pre-process illumina reads
faircloth-lab/2011-fairclothetal-systbiol-uce
[Unsupported] Code used in Faircloth et al. Ultraconserved Elements Anchor Genetics Markers
faircloth-lab/pd-ht
Public repository.
faircloth-lab/python-levenshtein
The Levenshtein Python C extension module contains functions for fast computation of Levenshtein distance and string similarity
faircloth-lab/tapir
Tally Approximations of Phylogenetic Informativeness Rapidly (TAPIR)
faircloth-lab/seqtools
Tools for sequence and alignment manipulation
faircloth-lab/edittag
edit distance sequence tags and helpers
faircloth-lab/mod-primer3
modified primer3 version that tracks primer3.sourceforge.net trunk
faircloth-lab/demuxipy
Locate, error-correct, trim, and organize (hierarchically) sequence-tagged next-generation DNA reads