ecohealthalliance/infrastructure
Automation code related to jenkins and docker based infrastructure
Discovered public repositories for ecohealthalliance in the GitHub catalog.
Automation code related to jenkins and docker based infrastructure
Grites-Gate module plugin
Public repository.
Public repository.
Public repository.
Public repository.
Data cleaning and analysis for Surveillance of Surveillance
Public repository.
Public repository.
Manual annotation interface
MaML (Mantle Metadata Language) is a metadata specification for scientific datasets, written in JSON Hyper-Schema.
A copy of EML, a metadata standard developed for the earth, environmental and ecological sciences.
PubCrawler uses the EpiTator framework (known at time of writing as Annie) to resolve toponyms in the PubMed Central Open Access Subset. It was used to create the estimate of reporting bias in the paper "Global hotspots and correlates of emerging zoonotic diseases".
Deep Forest Human Contact datasets
Public repository.
JavaScript library to transform coordinates from one coordinate system to another, including datum transformations
ranavirus reporting app
An open-source platform for biosurveillance & One Health research
Ansible role for setting up an elasticsearch river on a mongo collection
Public repository.
Public repository.
Public repository.
A grid search plugin for girder
Girder plugin exposing grits-api diagnosis
Simple summary statistics from GAINS database, in R.
Ansible deployment for EIDR
Public repository.
Ansible deployment scripts for GRITS
Basic meteor app for conducting user tests on grits
Public repository.
Public repository.
This project has moved to https://github.com/ecohealthalliance/EpiTator.
Public repository.
Reporting statistics for the GRID project
Public repository.
Powerfully visual web applications
GRITS uses natural language processing to extract disease-related information from text, including disease names, symptoms, dates, locations, case and death counts, and more.
Scripts for auto-generating annotations
A girder plugin for easier access to the ecohealthalliance incident database
Public repository.
Question and entry app for meteor projects
Public repository.
Sicki web platform
Visualizations for GRITS
Public repository.
Public repository.
Datamater
Scripts used for grits data analysis
Enter data into sickipedia
brat rapid annotation tool (brat) - for all your textual annotation needs