dkj/npg_seq_common
Utilities for handling NGS data
Developer Profile
dkj
Discovered public repositories for dkj in the GitHub catalog.
dkj/p4
Process and Pipe Pipeline Panacea
dkj/PCAP-core
NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project
dkj/sanger-npg-npg_qc
QC checks and metrics for Illumina NGS data
dkj/bowtie
An ultrafast memory-efficient short read aligner
dkj/htslib
C library for high-throughput sequencing data formats. This is the official repository.
dkj/biobambam
Tools for bam file processing
dkj/libmaus
libmaus
dkj/baton
iRODS client programs and API
dkj/bcviz
JavaScript visualisation for bamcheck file format
dkj/genotyping
Components of the WTSI genotype analysis pipeline.
dkj/sanger-npg-simtools
Program to create and process SIM files
dkj/sanger-samtools-samtools
Public repository.
dkj/sanger-npg-npg_tracking
WTSI Illumina sequencing instruments (HiSeq, MiSeq, GA) tracking
dkj/sanger-external-bwa
Burrow-Wheeler Aligner
dkj/sanger-npg-pb_calibration
Filter and calibration programs for Illumina BAM files
dkj/sanger-npg-illumina2bam
Public repository.