djreiss/cmonkey2-tools
Python tools and notebooks for running, using, and exploring results of cMonkey2 runs
Developer Profile
djreiss
Discovered public repositories for djreiss in the GitHub catalog.
djreiss/pynkey
test
djreiss/egrin2
scripts for running and post-processing multiple cMonkey and Inferelator runs to generate EGRIN 2.0 model
djreiss/dbdf
dbdf: an R package for treating database tables as if they were data.frames
djreiss/jasteroids3d
3D version of the game Asteroids, implemented in Java
djreiss/netmotsa
NetMotsa: Network-oriented Gibbs sampling for sequence motif detection
djreiss/junkey
Public repository.
djreiss/cMonkey1
Original code for cMonkey as published in 2007.
djreiss/tilingArraySeg
tilingArraySeg: An R package for multivariate segmentation of high-resolution tiling microarray data
djreiss/MeDiChI
MeDiChI R package: Model-based deconvolution of genome-wide DNA binding
djreiss/nanopond
my updates to Adam Ierymenko's Nanopond artificial life program (http://adam.ierymenko.name/nanopond.shtml)
djreiss/xNeoterics
My x11-based alife program, an update to the evolving neural network-based Neoterics
djreiss/yajalife
Yet another java-based artificial life program
djreiss/micropond
updates to micropond alife simulator (https://code.google.com/p/micropond/) which is an update to nanopond
djreiss/cmEvalEco
cmEvalEco
djreiss/DataFrames.jl
library for working with tabular data in Julia
djreiss/cMonkeyNwInf
Network Inference for cMonkey output based on Inferelator and elastic-net
djreiss/three.js
Javascript 3D Engine
djreiss/cMonkey
cMonkey integrated biclustering algorithm - official