dimitras/Bioinformatics_Algorithms_in_Python
Public repository.
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dimitras
Discovered public repositories for dimitras in the GitHub catalog.
dimitras/CommonPeptidesOrProteins
Find common peptides and proteins under defined conditions, like modification, score and so on.
dimitras/DifferentialExpression
Public repository.
dimitras/FindTopTransitions
Find top peaks per peptide match in MS data.
dimitras/Peptide_Profiling
Combine peptide lists from different replicates to one. Get a summary profiling of peptide existence across replicates.
dimitras/ProteinsToGenes
Get the genes of MS data to run GO enrichment analysis
dimitras/coursera_bio_algorithms_part_1
The programming assignments for Coursera course "Bioinformatics Algorithms (Part 1)"
dimitras/Zfish_KD_RNA_profiling
it is the sequence of zfish_annotation, with 2 more samples
dimitras/Mouse_AAgenes
Public repository.
dimitras/Mouse_LPGDs
Public repository.
dimitras/zfish_annotation
Public repository.
dimitras/GEOdatasets_analysis
R source for parsing GEO_family.soft files (using GEOquery lib) and creating a custom csv table. Run R source by command line (without having to get in R environment) by passing through arguments.
dimitras/translate_gene_to_common_names
Translate protein names(gene names, protein accnos, part of the protein description) to common names.
dimitras/aspirin_analysis
Aspirin Data Analysis on RoR
dimitras/mascot-csv-filters
find the common peptides through different experiments, filtered by various criteria and scoring the results
dimitras/Zfish-Project
fishing novel gene models and unexplained peptides from alternative splicing
dimitras/mascot-dat
A parser for Mascot DAT files
dimitras/LearningRuby
fasta parser, fastq parser, fastq to fasta conversion