dib-lab/2013-msu-zero-entry
A short bootcamp for MSU: zero-entry computational science.
Developer Profile
dib-lab
Discovered public repositories for dib-lab in the GitHub catalog.
dib-lab/2013-caltech-workshop
Public repository.
dib-lab/www-ged.msu.edu
Lab Web site at MSU
dib-lab/2013-paper-ssspe
4 pager for http://wssspe.researchcomputing.org.uk/
dib-lab/Haemonchus-pipeline
Automated pipeline to process genomic and RNASeq reads from Haemonchus contortus into a draft genome assembly and draft transcriptomic assembly.
dib-lab/khmer-protocols
Public repository.
dib-lab/2013-paper-outline-index
Public repository.
dib-lab/2013-khmer-counting
Paper code: "These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure"
dib-lab/2013-srop-summer
Public repository.
dib-lab/ged-lab-tracks
UCSC trackhub for GED Lab data sets.
dib-lab/msu-cse491-2013
Public repository.
dib-lab/2013-reproducible-bioinfo
Public repository.
dib-lab/2012-assembly-methods
Public repository.
dib-lab/blastparser
Public repository.
dib-lab/2012-assembly-artifacts
Public repository.
dib-lab/assembly-exercise
Shotgun sequencing of text, in CGI script form
dib-lab/2012-posa-chapter
Contributed Chapter for POSA Book
dib-lab/2012-paper-kmer-percolation
Public repository.
dib-lab/2012-paper-diginorm
Paper source, analysis notebook, and data generation/analysis scripts for diginorm paper
dib-lab/motility
Public repository.
dib-lab/screed
a simple read-only sequence database, designed for short reads
dib-lab/khmer
In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
dib-lab/gimme
gene modeller for RNAseq data based on assembly and alignment to reference genome.