dhimmel/hodgkins
Human disease network based on GWAS loci
Developer Profile
dhimmel
Discovered public repositories for dhimmel in the GitHub catalog.
dhimmel/stargeo
Generating expression signatures for disease using STARGEO
dhimmel/tissues
Gene–Tissue relationships from the TISSUES database
dhimmel/owltools
OWLTools
dhimmel/doaf
Processing data from DOAF, the Disease Ontology Annotation Framework
dhimmel/L1000
For our LINCS L1000 research see https://github.com/dhimmel/lincs instead
dhimmel/integrate
Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing
dhimmel/ppi
Compiling human protein–protein interactions
dhimmel/pathways
A compilation of pathway gene sets
dhimmel/plostime
Publication delays at PLOS and 3,475 other journals
dhimmel/ensembl-api
Working wiht the Ensembl Perl API
dhimmel/bgee
Extracting anatomy-specific gene expression in humans from Bgee
dhimmel/gtex
GTEx Expression Analysis
dhimmel/gwas-catalog
Extracting disease-gene associations from the GWAS Catalog
dhimmel/subscriptions
Analyzing journal subscription costs in the United Kingdom
dhimmel/clintrials
Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov
dhimmel/uberon
User-friendly anatomical structures data from the Uberon Ontology
dhimmel/obonet
OBO-formatted ontologies → networkx (Python 3)
dhimmel/mesh
User-friendly extensions to MeSH
dhimmel/altmetrics
Playing around with the Altmetic article attention data
dhimmel/erc
Processing human Evolutionary Rate Covariation data
dhimmel/entrez-gene
Processing the human Entrez Gene subset
dhimmel/hsdn
Analysis of the human symptoms–disease network
dhimmel/uniprot
Extract uniprot mappings to other vocabularies
dhimmel/bindingdb
Process BindingDB
dhimmel/lincs
Library of Integrated Cellular Signatures L1000
dhimmel/disease-ontology
User-friendly extensions to the Disease Ontology
dhimmel/dhimmel.com
Source of dhimmel.com. Work in progress
dhimmel/drugbank
User-friendly extensions of the DrugBank database
dhimmel/unichem
A python package for mapping compounds via UniChem
dhimmel/gene-ontology
User-friendly Gene Ontology annotations
dhimmel/oxyome
Oxygen-driven tumorigenesis on the interactome
dhimmel/side-effects
Public repository.
dhimmel/pizza
Intelligent selection of pizza toppings
dhimmel/pelicanyan
A Pelican port of Jekyll's Lanyon Theme
dhimmel/indications
Processing high-throughput drug indication resources.
dhimmel/blog
Source of the Satoshi Village blog
dhimmel/SIDER2
Calculating compound similarities using side effects and indications extracted from drug labels
dhimmel/dhimmel.github.io
GitHub User Page
dhimmel/rephetio
Miscellaneous Content for Project Rephetio to repurpose drugs
dhimmel/crocr
R interface for the the python croc (condensed-roc) package.
dhimmel/elevcan
Elevation and Cancer Incidence
dhimmel/2011-ucsf-bp205a-microarray-project
A set of python utilities for analyzing microarray data.