cindeem/jagust_rsfmri
Public repository.
Developer Profile
cindeem
Discovered public repositories for cindeem in the GitHub catalog.
cindeem/nitime
Timeseries analysis for neuroscience data
cindeem/dipy
Diffusion MR Imaging in Python
cindeem/ANTs
Advanced Normalization Tools (ANTs)
cindeem/ipython-notebooks
some of my ipython notebooks
cindeem/statsmodels
Statsmodels: statistical modeling and econometrics in Python
cindeem/Agile_Data_Code
Chapter-wise code for Agile Data the O'Reilly book
cindeem/scientific_library
The Virtual Brain scientific library. Requires external_geodesic_library
cindeem/external_geodesic_library
External Library Geodesic
cindeem/connectomeviewer
Software Application for the Visualization and Analysis of Multi-Modal Multi-Scale Network and Neuroimaging Data with Python
cindeem/rsFMRI
Preprocessing Pipeline for rsFMRI
cindeem/simple_timeline
simple example using Timeline
cindeem/py4science_code_of_conduct
Code of Conduct for py4science meeting
cindeem/pycon-code-of-conduct
pycon code of conduct
cindeem/quick_mod_scripts
quick scripts for new modularity tools
cindeem/python-berkeley
python resources of berkeley curated at a place
cindeem/networkx
Official NetworkX source code repository.
cindeem/pandaspythonfundamentals
quick and dirty from the book
cindeem/nipype
Workflows and interfaces for neuroimaging packages
cindeem/python-fundamentals
Materials for teaching the Python FUNdamentals workshop at UC Berkeley's D-lab
cindeem/nibabel
Python package to access a cacophony of neuro-imaging file formats
cindeem/Longi_Data
Tools for longitudinal analysis of cognitive data
cindeem/bxdebug
debugging repo for brainx tests
cindeem/graph_preproc
original preprocessing for graph analysis
cindeem/testgit
quick demo for lab git talk
cindeem/quickgit-lab
Quick Git Tutorial for the lab
cindeem/SKM_cluster
scripts to run sparse k-means clustering with resampling in order to create PIB+ and PIB- groups
cindeem/graph_tools
Command line Tools for graph analysis wrapping brainx
cindeem/fslnets
python wrap of fslnets
cindeem/Bokeh
Statistical plots for Python
cindeem/boot-camps
Software Carpentry boot camp material
cindeem/myvim
my clutser vim settings
cindeem/connectivity
tools for connectivity analysis
cindeem/nipet
Graphical Analysis of PET data
cindeem/nicm
Nifti center of mass
cindeem/brainx
Tools for analysis of brain imaging-derived networks, based on NetworkX
cindeem/d3py
a plottling library for python, based on D3
cindeem/ardatools
managing data repository
cindeem/pyladies-sf
Code from pyladies meetings
cindeem/PetProcessing
lab module for processing pet
cindeem/canica
Canonical ICA for fMRI
cindeem/nibabel-nan
explore issue with nibabel nan dtype
cindeem/xipy
Cross-modality Imaging in Python
cindeem/nipy
Neuroimaging in python