choener/taffybar
A slightly fancy status bar for xmonad
Developer Profile
choener
Discovered public repositories for choener in the GitHub catalog.
choener/NaturalLanguageAlphabets
Alphabet and word encodings in natural languages
choener/RNAdesign
Multi-target RNA sequence design
choener/DnaProteinAlignment
Frameshift-aware semi-global alignment of DNA and protein sequences
choener/GrammarProducts
Products of linear and context-free grammars
choener/FormalGrammars
Context-free and linear grammars in Haskell (parsing, pretty-printing, embedded DSL)
choener/BiobaseBlast
BLAST-related tools
choener/hermit-Nussinov78
ADPfusion + HERMIT, Nussinov78 example
choener/parsers
Generic parser combinators
choener/ViennaRNA-bindings
Bindings to the ViennaRNA package.
choener/fgl-extras-decompositions
Graph decomposition algorithms for Erwig's FGL.
choener/PKGBUILDs
PKGBUILDs modified to build on Arch Linux ARM
choener/RNAfold
ViennaRNA RNAfold using the ADPfusion library
choener/Nussinov78
Nussinov78 using the ADPfusion library
choener/ADPfusion
Efficient, high-level dynamic programming
choener/BiobaseFR3D
Importer for FR3D resources
choener/BiobaseVienna
RNAfold energy tables and Turner 2004 converter
choener/BiobaseTurner
Turner 2004 energy parameter parser
choener/BiobaseXNA
efficient encoding of short RNA and DNA sequences
choener/PrimitiveArray
no-frills Haskell arrays
choener/BiobaseFasta
streaming FASTA handling in Haskell
choener/BiobaseInfernal
Haskell library to handle Infernal-related file formats