bingoloafer/itcrispr
Interface to assemble and track progress of CRISPR sequence experiments in BioNumerics (6.5 - 6.6)
Discovered public repositories for bingoloafer in the GitHub catalog.
Interface to assemble and track progress of CRISPR sequence experiments in BioNumerics (6.5 - 6.6)
CRISPR simulation
Public repository.
Multiple Collinearity Scan toolkit. Various downstream displaying and analysis tools for synteny detected using mcscan approach.
Perl interface to Pathway Tools
Identify causative mutations in a model genome from NGS reads using the NGM method.
An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)
This plugin is to measure Arabidopsis leaf and petiole length, area, and perimeter. It was cloned from https://bitbucket.org/jnmaloof/leafj/overview
An HMM to find duplicated regions in Arabidopsis genomes
Development of Arabidopsis dataset for www.ebi.ac.uk/metabolights
Public repository.
Toolkit for genome database
The Plant Sciences Small RNA processing pipeline
Scripts to analyze UTRs
Filter miRNA from mipred output file and creat xls file
Public repository.