alexharkess/jcvi
Python utility libraries on genome assembly, annotation and comparative genomics
Developer Profile
alexharkess
Discovered public repositories for alexharkess in the GitHub catalog.
alexharkess/bread_and_butter
My bread and butter scripts for short read inspection, cleaning, tophat2 alignment, bisulfite alignment. Free to anyone.
alexharkess/ipomoeae_repeats
Public repository.
alexharkess/AsparagusExpressionDB
A Shiny interface to access cuffdiff gene expression data for Asparagus
alexharkess/alexharkess.github.io
my personal website
alexharkess/HMMER2GO
Annotate DNA sequences for Gene Ontology terms
alexharkess/AmborellaExpressionDB
A Shiny interface to access cuffdiff gene expression data for Amborella
alexharkess/jbrowseMethylation
scripts for parsing bismark methylation output into jbrowse-friendly formats
alexharkess/tosr
An R interface to the Tree of Sex database (http://treeofsex.org/)
alexharkess/dawgpaws
DAWGPAWS is a tool for discovering the location of the genes and transposable elements in eukaryotic genomic sequences.