adamewing/tebreak
Find and characterise transposable element insertions
Developer Profile
adamewing
Discovered public repositories for adamewing in the GitHub catalog.
adamewing/edots
Expression Divergence Over Time Series
adamewing/l1seq.old
Scripts for analyzing "L1-seq" data generated by targeted L1-specific sequencing (Ewing and Kazazian 2010, doi:10.1101/gr.106419.110)
adamewing/VCFcomparator
Tool for comparing mutation calls in VCF format
adamewing/GRIPper
Find non-reference processed pseudogene insertions from discordant read pair mappings
adamewing/bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
adamewing/discord-retro
Find non-reference TE insertions from discordant read pair mappings