TuftsBCB/experiments
A collection of experiments used for both exploratory research and in publications.
Developer Profile
TuftsBCB
Discovered public repositories for TuftsBCB in the GitHub catalog.
TuftsBCB/FunctionalPath
Building functional path from Gene Ontology hierarchy and evaluate protein function prediction using the paths
TuftsBCB/flib
A command line tool to interface with fragment libraries.
TuftsBCB/foods
Our favorite foods.
TuftsBCB/git-tutorial
A git-by-example tutorial that demonstrates basic git commands and pushing to GitHub repositories.
TuftsBCB/pybcb
A small Python module that provides convenience functions for running experiments.
TuftsBCB/fragbag
A fast implementation of FragBag for protein structures and sequences.
TuftsBCB/tools
A set of command line programs that interface with the repositories in the TuftsBCB organization.
TuftsBCB/hhfrag
An implementation of Kalev and Habeck's HHfrag algorithm in Go.
TuftsBCB/structure
A Go library that provides types and functions for common operations on protein structures.
TuftsBCB/apps
Library wrappers in Go for computational biology tools that are typically operated from the command line.
TuftsBCB/seq
Provides common operations for dealing with biological sequence data, including data representation and sequence alignment.
TuftsBCB/io
A set of packages to read and write common file formats produced by computational biology software.
TuftsBCB/SMURFBuild
A fork of HMMER-3.0 for the purposes of MRFy and SMURF