OpenTreeOfLife/phylesystem
phylogenetic study document storage used by Open Tree of Life
Discovered public repositories for OpenTreeOfLife in the GitHub catalog.
phylogenetic study document storage used by Open Tree of Life
doc store for the Open Tree of Life study curation API
A repo for the 2014 OpenTree / Arbor / HIP hackathon
Yet another testing repository. This one is full size for performance testing. But still temporary.
No code -- just an issue tracker for general feedback (sent here via GitHub's issues API)
temp repo for testing api when nexsons are stored in 1.2.1 syntax
A collection of current (and past) server configuration files for opentree components
python library for interacting with Open Tree of Life resources
Open Tree Reference Taxonomy (OTT) tools
Testing repo which is a small subset of phylesystem
indexing service for the OpenTreeOfLife nexson repository
JSON files for visualizing source trees aligned to taxonomies
General Java classes for Open Tree of Life development with Neo4j
API access to Open Tree of Life treestore
miscellaneous scripts and data for concerns that span more than one of the Open Tree code repositories: integration tests, system statistics, etc.
Initially a collection of nexson files to test parsing; might also be useful for testing repository implementations
Graph of Life Commander
Opentree browsing and curation web site. For overarching or cross-repo concerns, please see the 'germinator' repo.
command tool for creating NeXML from other file formats
Scripts for testing some of the software tools produced by the Open Tree of Life effort
web2py app for tree store and grafting
tree/graph viewer and conflict visualizer for the opentree project
taxonomy graphdb
Public repository.
Source tree graph database
simulator of collections of trees that are based on a classification with stochastic errors introduced