OpenTreeOfLife/phylesystem
phylogenetic study document storage used by Open Tree of Life
Developer Profile
OpenTreeOfLife
Discovered public repositories for OpenTreeOfLife in the GitHub catalog.
OpenTreeOfLife/phylesystem-1
doc store for the Open Tree of Life study curation API
OpenTreeOfLife/hackathon
A repo for the 2014 OpenTree / Arbor / HIP hackathon
OpenTreeOfLife/phylesystem-0
Yet another testing repository. This one is full size for performance testing. But still temporary.
OpenTreeOfLife/feedback
No code -- just an issue tracker for general feedback (sent here via GitHub's issues API)
OpenTreeOfLife/hbf_phylesystem_test
temp repo for testing api when nexsons are stored in 1.2.1 syntax
OpenTreeOfLife/deployed-systems
A collection of current (and past) server configuration files for opentree components
OpenTreeOfLife/peyotl
python library for interacting with Open Tree of Life resources
OpenTreeOfLife/reference-taxonomy
Open Tree Reference Taxonomy (OTT) tools
OpenTreeOfLife/phylesystem_test
Testing repo which is a small subset of phylesystem
OpenTreeOfLife/oti
indexing service for the OpenTreeOfLife nexson repository
OpenTreeOfLife/taxonomy-stree-json
JSON files for visualizing source trees aligned to taxonomies
OpenTreeOfLife/ot-base
General Java classes for Open Tree of Life development with Neo4j
OpenTreeOfLife/phylesystem-api
API access to Open Tree of Life treestore
OpenTreeOfLife/germinator
miscellaneous scripts and data for concerns that span more than one of the Open Tree code repositories: integration tests, system statistics, etc.
OpenTreeOfLife/nexson-sandbox
Initially a collection of nexson files to test parsing; might also be useful for testing repository implementations
OpenTreeOfLife/gcmdr
Graph of Life Commander
OpenTreeOfLife/opentree
Opentree browsing and curation web site. For overarching or cross-repo concerns, please see the 'germinator' repo.
OpenTreeOfLife/2nexml
command tool for creating NeXML from other file formats
OpenTreeOfLife/opentree-testrunner
Scripts for testing some of the software tools produced by the Open Tree of Life effort
OpenTreeOfLife/phylografter
web2py app for tree store and grafting
OpenTreeOfLife/argus
tree/graph viewer and conflict visualizer for the opentree project
OpenTreeOfLife/taxomachine
taxonomy graphdb
OpenTreeOfLife/PhylografterNeo4j
Public repository.
OpenTreeOfLife/treemachine
Source tree graph database
OpenTreeOfLife/big-tree-collection-simulator
simulator of collections of trees that are based on a classification with stochastic errors introduced