GuillaumeHolley/BloomFilterTrie
An alignment-free, reference-free and incremental data structure for colored de Bruijn graph with application to pan-genome indexing.
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GuillaumeHolley
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GuillaumeHolley/BlastGraph
BlastGraph is a new tool for computing intensive approximate pattern matching in a sequence graph or a de-Bruijn graph. Given an oriented graph and a set of query sequences, it detects paths in the graph on which query sequences align at most at the given edit distance.