BenLangmead/ads1-slides
Slides for Algorithms for DNA Sequencing Coursera class
Discovered public repositories for BenLangmead in the GitHub catalog.
Slides for Algorithms for DNA Sequencing Coursera class
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
Public repository.
Experiments for "Scaling read aligners to hundreds of threads on general-purpose processors"
Publicly-visible Langmead Lab resources
Lab simulator
Scripts, manifests, etc for grabbing and lightly analyzing public data
Resources to help use JHU's compute resources
Code, examples, reading list for JHU Frontiers of Sequencing Data Analysis class
Code and examples for JHU Computational Genomics class
Tools for running RNA-seq simulators and analysis tools at JHU
A fast and sensitive gapped read aligner
An ultrafast memory-efficient short read aligner
Cloud-scale differential expression for RNA-seq
Variant calling from sequence reads using cloud computing
Alignment of bisulfite sequence reads and tabulation of read-level methylation measurements